BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C02LP1|AL427450
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1158 1862 0.0
>3x_Contig1158
Length = 4503
Score = 1862 bits (938), Expect = 0.0
Identities = 970/978 (99%), Gaps = 3/978 (0%)
Strand = Plus / Plus
Query: 5 tatctccaactttagctatagatctacacctatgatataagtaaagcctccacagttttc 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2307 tatctccaactttagctatagatctacacctatgatataagttaagcctccacagttttc 2366
Query: 65 ttaatcggaaatatggatcaacgaaagaaatcctttccaaattcaatcaatatctatttc 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2367 ttaatcggaactatggatcaacgaaagaaatcctttccaaattcaatcaatatctatttc 2426
Query: 125 ctgattcgatttcctaacactctttttttttttttttttttaaatttcctgcccacttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2427 ctgattcgatttcctaacactctttttttttttttttttttaaatttcctgcccacttcc 2486
Query: 185 gatgtccacttttcttgcagaaattgtcgcagcagtrgcaggggtttggaactgacacac 244
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 2487 gatgtccacttttcttgcagaaattgtcgcagcagtggctggggtttggaactgacacac 2546
Query: 245 caggacaaacaggtgagcattaatttcaaggaaacttgagaaaaaaaattgaaataaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 caggacaaacaggtgagcattaatttcaaggaaacttgagaaaaaaaattgaaataaaac 2606
Query: 305 taaactgaaagcctttttaatcttctaaccctttgtgcagcgtgatactttgccggtatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 taaactgaaagcctttttaatcttctaaccctttgtgcagcgtgatactttgccggtatc 2666
Query: 365 tctttgtatattcttgggatacacttctgttcagccgctggtcaagagttggaagaactg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 tctttgtatattcttgggatacacttctgttcagccgctggtcaagagttggaagaactg 2726
Query: 425 cagggaactagaactcggggatacagagctaggctaggatcgacgaag-gtggaagccga 483
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2727 cagggaactagaactcggggatacagagctaggctaggatcgacgaagtgtggaagccga 2786
Query: 484 a-gataaaaaacggggtatacaaaacaatataacaagacgctttttattacttttaactg 542
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2787 aggataaaaaacggggtatacaaaacaatataacaagacgctttttattacttttaactg 2846
Query: 543 gatcaaaattgagcgaataaatcacatacagagagttagaagggaagcttaatcacaggt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2847 gatcaaaattgagcgaataaatcacatacagagagttagaagggaagcttaatcacaggt 2906
Query: 603 cgggacgatttagataggattgtgaaattttgtttttgtttttggttcgtcatttcaata 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2907 cgggacgatttagataggattgtgaaattttgtttttgtttttggttcgtcatttcaata 2966
Query: 663 gttctgcctggagttataactgtatttggagtttccagttttacaatcaagaaaaataag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2967 gttctgcctggagttataactgtatttggagtttccagttttacaatcaagaaaaataag 3026
Query: 723 acggaaaatcaatacacactttgagaaataaagtaaatagttttagtctttgggggagca 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 acggaaaatcaatacacactttgagaaataaagtaaatagttttagtctttgggggagca 3086
Query: 783 agacagaaagaaagaaagacagaaagaaagaaagacagaaagggtcaaatctacaacaaa 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 agacagaaagaaagaaagacagaaagaaagaaagacagaaagggtcaaatctacaacaaa 3146
Query: 843 agtcgttgatatactgctttgataagaagtagccagggattattgtctagagtaaaacgt 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 agtcgttgatatactgctttgataagaagtagccagggattattgtctagagtaaaacgt 3206
Query: 903 ttcatcactcggcttgtgttttccagttttataatataaccattggagagagaaagataa 962
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3207 ttcatcactcggc-tgtgttttccagttttataatataaccattggagagagaaagataa 3265
Query: 963 agtggtctacsgaaattt 980
|||||||||| |||||||
Sbjct: 3266 agtggtctaccgaaattt 3283
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,964
Number of Sequences: 1807
Number of extensions: 22964
Number of successful extensions: 3834
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)